Package: TSS.RESTREND 0.3.1

TSS.RESTREND: Time Series Segmentation of Residual Trends

Time Series Segmented Residual Trends is a method for the automated detection of land degradation from remotely sensed vegetation and climate datasets. TSS-RESTREND incorporates aspects of two existing degradation detection methods: RESTREND which is used to control for climate variability, and BFAST which is used to look for structural changes in the ecosystem. The full details of the testing and justification of the TSS-RESTREND method (version 0.1.02) are published in Burrell et al., (2017). <doi:10.1016/j.rse.2017.05.018>. The changes to the method introduced in version 0.2.03 focus on the inclusion of temperature as an additional climate variable. This allows for land degradation assessment in temperature limited drylands. A paper that details this work is currently under review. There are also a number of bug fixes and speed improvements. Version 0.3.0 introduces additional attribution for eCO2, climate change and climate variability the details of which are in press in Burrell et al., (2020). The version under active development and additional example scripts showing how the package can be applied can be found at <https://github.com/ArdenB/TSSRESTREND>.

Authors:Arden Burrell [aut, cre]

TSS.RESTREND_0.3.1.tar.gz
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TSS.RESTREND.pdf |TSS.RESTREND.html
TSS.RESTREND/json (API)

# Install 'TSS.RESTREND' in R:
install.packages('TSS.RESTREND', repos = c('https://ardenb.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • rabbitACPtable - Rabbit Impacted Vegetation Precipitation Accumulation Table
  • segRESTREND - Data frame containing the annual data for a segRESTREND analysis
  • segRESTRENDCTSR - Data frame containing the Complete Times Series data for a segmented RESTREND analysis
  • segRESTRENDctRF - Data frame containing the raw rainfall data set for the segRESTREND data, ending dec 2013 with a frquency of 12
  • segRESTRENDrfTab - Precipitation Accumulation Table for the segRESTREND demonstration pixel
  • segVPR - Data frame containing the annual data for a segVPR analysis
  • segVPRCTSR - Data frame containing the Complete Times Series data for a segmented VPR (VEGETATION PRECIPTATION RELATIONSHIP) analysis
  • segVPRctRF - Data frame containing the raw rainfall data set for the segVPR data, ending dec 2013 with a frquency of 12
  • segVPRrfTab - Precipitation Accumulation Table for the segVPR demonstration pixel
  • stdRESTREND - Data frame containing the annual data for a standard Restrend analysis
  • stdRESTRENDCTSR - Data frame containing the Complete Times Series data for a standard Restrend analysis
  • stdRESTRENDctRF - Data frame containing the raw rainfall data set ending dec 2013 with a frquency of 12
  • stdRESTRENDrfTab - Precipitation Accumulation Table for the standard RESTREND demonstration pixel

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.36 score 1 stars 23 scripts 166 downloads 12 exports 62 dependencies

Last updated 4 years agofrom:11b69c9875. Checks:OK: 3 NOTE: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 02 2024
R-4.5-winOKNov 02 2024
R-4.5-linuxOKNov 02 2024
R-4.4-winNOTENov 02 2024
R-4.4-macNOTENov 02 2024
R-4.3-winNOTENov 02 2024
R-4.3-macNOTENov 02 2024

Exports:ACP.calculatorAnMaxVIAnnualClim.CalCHOWclimate.accumulatorfranksCO2RESTRENDseg.RESTRENDseg.VPRTSSRattributionTSSRESTRENDVPR.BFAST

Dependencies:backportsbfastbroomclicolorspacecpp11curldplyrfansifarverforecastfracdiffgenericsggplot2gluegtableisobandjsonlitelabelinglatticelifecyclelmtestmagrittrMASSMatrixmblmmgcvmunsellnlmennetpillarpkgconfigpurrrquadprogquantmodR6rbibutilsRColorBrewerRcppRcppArmadilloRcppRollRdpackrlangsandwichscalesstringistringrstrucchangestrucchangeRcpptibbletidyrtidyselecttimeDatetseriesTTRurcautf8vctrsviridisLitewithrxtszoo

Readme and manuals

Help Manual

Help pageTopics
TSS.RESTREND: Time Series Segmented RESidual TRENDTSS.RESTREND-package TSS.RESTREND
Antecedental Rainfall (and temperature) Accumulation calculator for the VI Complete Time SeriesACP.calculator
Annual max VI CalculatorAnMaxVI
Antecedental accumulation calculator for the annual max VI time seriesAnnualClim.Cal
Chow test on detected breakpointsCHOW
Climate Accumulatorclimate.accumulator
Franks CO2 Vegetation correctionfranksCO2
Plot Function for ojects of the TSSRESTREND classplot.TSSRESTREND
Print function for class TSSRESTRENDprint.TSSRESTREND
Rabbit Impacted Vegetation Precipitation Accumulation TablerabbitACPtable
RESTREND (RESidual TREND)RESTREND
Segmented RESTREND (RESidual TREND)seg.RESTREND
Segmented Vegetation Climate Relationshipseg.VPR
Data frame containing the annual data for a segRESTREND analysissegRESTREND
Data frame containing the raw rainfall data set for the segRESTREND data, ending dec 2013 with a frquency of 12segRESTRENDctRF
Data frame containing the Complete Times Series data for a segmented RESTREND analysissegRESTRENDCTSR
Precipitation Accumulation Table for the segRESTREND demonstration pixelsegRESTRENDrfTab
Data frame containing the annual data for a segVPR analysissegVPR
Data frame containing the raw rainfall data set for the segVPR data, ending dec 2013 with a frquency of 12segVPRctRF
Data frame containing the Complete Times Series data for a segmented VPR (VEGETATION PRECIPTATION RELATIONSHIP) analysissegVPRCTSR
Precipitation Accumulation Table for the segVPR demonstration pixelsegVPRrfTab
Data frame containing the annual data for a standard Restrend analysisstdRESTREND
Data frame containing the raw rainfall data set ending dec 2013 with a frquency of 12stdRESTRENDctRF
Data frame containing the Complete Times Series data for a standard Restrend analysisstdRESTRENDCTSR
Precipitation Accumulation Table for the standard RESTREND demonstration pixelstdRESTRENDrfTab
Vegetation change attribution using the Time Series Segmentation of Residual Trends (MAIN FUNCTION)TSSRattribution
Time Series Segmentation of Residual Trends (MAIN FUNCTION)TSSRESTREND
BFAST Breakpoint DetectorVPR.BFAST